jags

Download        : docker pull ghcr.io/autamus/jags
Compressed Size : 51MB

Description

JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation not wholly unlike BUGS

Usage

Pull (Download)

To download the latest version of jags run,

docker pull ghcr.io/autamus/jags:latest

or to download a specific version of jags run,

docker pull ghcr.io/autamus/jags:4.3.0

Run

To run the container as an application run,

docker run --rm ghcr.io/autamus/jags jags --version

or to run the container in an interactive session run,

docker run -it --rm ghcr.io/autamus/jags bash

Mounting volumes between the container and your machine

To access files from your machine within the jags container you’ll have to mount them using the -v external/path:internal/path option.

For example,

docker run -v ~/Documents/Data:/Data ghcr.io/autamus/jags jags /Data/myData.csv

which will mount the ~/Documents/Data directory on your computer to the /Data directory within the container.

HPC

If you’re looking to use this container in an HPC environment we recommend using Singularity-HPC to use the container just as any other module on the cluster. Check out the SHPC jags container here.